neurom.io.swc.SWCRawDataWrapper

class neurom.io.swc.SWCRawDataWrapper(raw_data, fmt, _=None)

Bases: neurom.io.datawrapper.RawDataWrapper

Specialization of RawDataWrapper for SWC data

SWC data has looser requirements on the point IDs, so an ID to array index look-up table must be maintained.

Index validity is checked and mappings performed before delegating to base class methods.

Methods

__init__
get_children	get list of ids of children of parent with id idx
get_col	Get column from ID
get_end_points	get the end points of the tree
get_fork_points	Get list of point ids for points with more than one child
get_ids	Get the list of ids for rows satisfying an optional row predicate
get_parent	get the parent of element with id idx
get_point	Get point data for element idx
get_row	Get row from idx
iter_row	Get an row iterator to a starting at start_id and satisfying a row predicate pred.
soma_points	Get all the soma points