neurom.fst.get¶
-
neurom.fst.get(feature, obj, **kwargs)¶ Obtain a feature from a set of morphology objects
- Parameters:
- feature (string): feature to extract. obj: a neuron, population or neurite tree. **kwargs: parameters to forward to underlying worker functions.
- Returns:
- features as a 1D or 2D numpy array.
- Neurite features (neurite, neuron, neuron population):
- local_bifurcation_angles
- number_of_bifurcations
- number_of_forking_points
- number_of_neurites
- number_of_sections
- number_of_sections_per_neurite
- number_of_segments
- number_of_terminations
- partition
- principal_direction_extents
- remote_bifurcation_angles
- section_areas
- section_branch_orders
- section_lengths
- section_path_distances
- section_radial_distances
- section_tortuosity
- section_volumes
- segment_lengths
- segment_meander_angles
- segment_midpoints
- segment_radial_distances
- segment_radii
- segment_taper_rates
- total_length
- total_length_per_neurite
- Neuron features (neuron, neuron population):
- soma_radii
- soma_surface_areas
- trunk_origin_azimuths
- trunk_origin_elevations
- trunk_origin_radii
- trunk_section_lengths