Fork from github
Develop on your fork
Make a pull request
Before making a pull request, make sure that your fork is up to date and that all the tests pass locally. This will make it less likely that your pull request will get rejected by making breaking changes or by failing the test requirements.
Running the tests¶
The tests require that you have cloned the repository, since the test code is
not distributed in the package. It is recommended to use
tox for this.
$ git clone https://github.com/BlueBrain/NeuroM.git $ cd NeuroM $ tox
This method takes care of installing all extra dependencies needed for tests, diagnosing results, etc. It runs documentation check, pylint and the tests in sequence. Also it can run them individually:
$ tox -e py38-lint # runs only pylint $ tox -e py38-docs # run only documentation check $ tox -e py38 # run only the tests
You can also run tests manually via pylint but you need to make sure that you have installed all required dependencies in your virtual environment:
(your virtual env name)$ pip install neurom[plotly] pytest mock
Then, run the tests manually. For example,
(your virtual env name)$ pytest tests
Building documentation locally¶
To build documentation, go into project’s
$ cd doc # assuming that you start from the project's root.
Make sure you have installed into your virtual environment libraries from docs extras:
pip install neurom[docs]. Then run the command in the
$ make html
This builds the documentation in
doc/build. To view it, open
We test the code against Python 3.8, 3.9, 3.10, and 3.11.