neurom.check.neuron_checks.has_no_fat_ends

neurom.check.neuron_checks.has_no_fat_ends(neuron, multiple_of_mean=2.0, final_point_count=5)

Check if leaf points are too large

Arguments

neuron(Neuron): The neuron object to test multiple_of_mean(float): how many times larger the final radius has to be compared to the mean of the final points final_point_count(int): how many points to include in the mean

Returns:CheckResult with result list of ids of bad sections

Note

A fat end is defined as a leaf segment whose last point is larger by a factor of multiple_of_mean than the mean of the points in final_point_count