neurom.check.structural_checks

Module with consistency/validity checks for raw data blocks

Functions

has_all_finite_radius_neurites	Check that all points with neurite type have a finite radius
has_increasing_ids	Check that IDs are increasing
has_sequential_ids	Check that IDs are increasing and consecutive
has_soma_points	Checks if the TYPE column of raw data block has an element of type soma
has_valid_neurites	Check if any neurites can be reconstructed from data block
has_valid_soma	Check if a data block has a valid soma
is_single_tree	Check that data forms a single tree
no_missing_parents	Check that all points have existing parents Point’s parent ID must exist and parent must be declared before child.