neurom.check.neuron_checks.has_all_nonzero_neurite_radii

neurom.check.neuron_checks.has_all_nonzero_neurite_radii(neuron, threshold=0.0)[source]

Check presence of neurite points with radius not above threshold

Parameters:
  • neuron (Neuron) – The neuron object to test
  • threshold – value above which a radius is considered to be non-zero
Returns:

CheckResult with result including list of (section ID, point ID) pairs of zero-radius points