neurom.check.neuron_checks.has_no_narrow_neurite_section¶
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neurom.check.neuron_checks.
has_no_narrow_neurite_section
(neuron, neurite_filter, radius_threshold=0.05, considered_section_min_length=50)[source]¶ Check if the neuron has dendrites with narrow sections
Parameters: - neuron (Neuron) – The neuron object to test
- neurite_filter (callable) – filter the neurites by this callable
- radius_threshold (float) – radii below this are considered narro
- considered_section_min_length (float) – sections with length below
- are not taken into account (this) –
Returns: CheckResult with result. result.info contains the narrow section ids and their first point