neurom.io.utilsΒΆ

Utility functions and classes for higher level RawDataWrapper access

Functions

get_initial_neurite_segment_ids Returns a list of IDs of initial neurite tree segments
get_morph_files Get a list of all morphology files in a directory
get_soma_ids Returns a list of IDs of points that are somas
load_neuron Loads a neuron keeping a record of the filename.
load_neurons Create a list of Neuron objects from each morphology file in directory or from a list or tuple of file names
load_population Create a population object from all morphologies in a directory of from morphologies in a list of file names
load_trees Load all trees in an input file
make_neuron Build a neuron from a raw data block
make_tree Return a tree obtained from a raw data block